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Home » Recipes » Dessert

Vegan Lemon Poppy Seed Muffins (Healthy, Oil-free)

Published: Mar 7, 2024 by Shane Martin · This post may contain affiliate links.

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Healthy Lemon Poppy Seed muffins are perfect for breakfast, snacks, or dessert. They’re light, fluffy, and bursting with lemon flavor, making them a delightful treat for any occasion. Vegan, oil-free, and ready in less than 30 minutes!

lemon poppy seed muffins on cutting board

Lemon poppy seed muffins, for me, are the essence of springtime. They’re like tasty little rays of sunshine. The humble crunch of poppy seeds combined with the sweet and citrusy flavors is pure heaven. Add a hot cup of coffee, and life couldn’t get much sweeter(see what I did there).

This is why I get excited walking by lemons in the produce section when the weather gets warm. Weird, I know. But these vegan lemon poppy seed muffins reflect that excitement. And for good reason.

The texture is light, fluffy, and moist. The flavor is the perfect combination of sweet and tangy. And best of all, all this goodness is achieved without using eggs or oil. You’ll have to taste to believe. I’ve also included a recipe for an optional glaze that will blow your mind.

lemon poppy seed muffins stacked
In This Post
  • Vegan Muffin Recipes
  • Ingredients you need for this recipe
  • How to make vegan lemon poppy seed muffins
  • Substitutions
  • Variations for vegan lemon muffins
  • How do I store lemon poppy seed muffins?
  • FAQs
  • Tips for making the best vegan lemon poppy seed muffins
  • How do I serve vegan lemon poppy seed muffins?
  • Want more vegan sweet treats?
  • Vegan Lemon Poppy Seed Muffins (Healthy, Oil-free)
  • 💬 Community

Vegan Muffin Recipes

Are you a muffin freak like me? Be sure and check out my vegan banana chocolate chip muffins, healthy pumpkin muffins, or these hearty apple banana oat muffins.

Muffins don’t always have to be sweet. These vegan cheddar jalapeño cornbread muffins will rock your world. Perfect with soup, chili, or when you need a little savory nibble.

All right, let’s get to it. Ladies and gentlemen, Vegan Lemon Poppy Seed Muffins!

bowl of lemons

Ingredients you need for this recipe

You don’t need complicated ingredients to make delicious baked goods. These vegan lemon muffins are simple, full of flavor, and healthy.

  • whole wheat pastry flour
  • baking powder and baking soda
  • poppy seeds
  • unsweetened non-dairy milk of choice
  • pure maple syrup
  • unsweetened applesauce
  • vanilla extract
  • lemon zest
Vegan lemon poppy seed muffins

How to make vegan lemon poppy seed muffins

Create delightful vegan lemon poppy seed muffins that are not only oil-free but also bursting with tangy lemon flavor and speckled with crunchy poppy seeds. This easy recipe combines wholesome ingredients for a guilt-free treat that is perfect for any time of day.

flour in bowl
wet ingredients

Combine the dry ingredients into a large mixing bowl and whisk together.

Add the wet ingredients to a separate bowl and mix well. Let it sit for a couple of minutes.

batter with spoon
batter in muffin tin

Pour the wet ingredients into the dry ingredients. Stir until just combined, being careful not to overmix.

Divide the batter evenly in a muffin tin and bake for 18-20 minutes, or until a toothpick inserted into the center of a muffin comes out clean.

Optional: Once the muffins have cooled down, drizzle with lemon glaze. (The recipe is in the recipe card below.)

lemon poppy seed muffins on cooking rack.

Substitutions

It’s possible you might not have these exact ingredients sitting in your pantry. And you don’t want to run out and buy anything because you want muffins…NOW! Here are a few possible substitutions:

  • Lemons: Should you find yourself without lemons, I have found a few other creative solutions to work exceptionally well. Try using lime juice or apple cider vinegar. You won’t get lemon muffins, but you will get good muffins.
  • Flour: I prefer Bob’s Red Mill Organic Unbleached All-Purpose Flour. But whole wheat pastry flour or whole wheat flour are great options.
  • Non-dairy milk: Feel free to use your favorite dairy-free milk. Soy milk and almond milk have yielded the best results for me.
  • Poppy seeds: Chia seeds or sesame seeds are good options if you don’t have poppy seeds in your spice drawer or rack.
  • Yogurt: Replace the applesauce with your favorite non-dairy yogurt for really moist lemon poppy seed muffins.

Variations for vegan lemon muffins

I’m completely content to enjoy these healthy lemon poppy seed muffins as is, but they are also very versatile. Here are some suggestions for add-ins and getting creative:

  • Berries: Try an assortment of berries for color and flavor. Blueberries are my favorite, and they pair excellently with lemon.
  • Oats: Tossing in some old-fashioned oats is a great way to add fiber and heartiness to these delicious muffins. Perfect for breakfast!
  • Nuts and seeds: Adding chopped walnuts or cashews will give these a nice crunch and a little extra protein if that’s your thing. If you can’t have nuts toss in my pepitas or sunflower seeds.
vegan lemon poppy seed muffins

How do I store lemon poppy seed muffins?

It’s best to enjoy these Vegan Lemon Poppy Seed Muffins fresh, but here’s how you can store them for later:

  • Room Temperature: The muffins must be completely cooled down before storing them in an airtight container to avoid any moisture that might cause early spoilage. Line the bottom of the container with paper towels and store the container in a cool, dry place, and the muffins should remain fresh for up to three days.
  • Fridge: For optimal freshness, store the muffins in an airtight container in the refrigerator for up to 5 days.
  • Freezer: Wrap each lemon muffin individually in wax paper and place them in a freezer bag. Freeze without the glaze and add it after they are defrosted. The muffins can stay frozen for up to 3 months.
lemon poppy seed muffin

FAQs

Can I make these muffins gluten-free?

Absolutely! Use a 1:1 gluten-free flour mix to make the healthiest and most delicious gluten-free lemon poppy seed muffins.

Do I have to use poppy seeds?

No, they are purely optional. Omit them, and you will find delicious vegan lemon muffins ready to be devoured.

Can I use almond flour to make these lemon poppy seed muffins?

No, no, no! It will not rise and create a soupy mess. Use a 1:1 gluten-free all-purpose flour blend if you want to go gluten-free.

lemon poppy seed muffin with icing

Tips for making the best vegan lemon poppy seed muffins

Follow these pro tips to ensure your muffin success.

  • Do Not Overmix: When combining the dry and wet mixtures, gently stir and fold the batter to avoid overmixing, which leads to dense and chewy muffins. A few lumps are ok. Think, pancakes.
  • Measure the Flour: When measuring flour, don’t eyeball it or scoop it out. Avoid packing or tapping the cup. After filling, use a butter knife or scraper to brush off any excess flour.
  • Room Temperature: The batter will mix much better and create a smoother texture if the wet and dry ingredients are close to the same temperature.
  • Let the Lemon Poppy Seed Muffins Cool: We all want to dive in and chow down, but good things come to those who wait. But if you plan on adding glaze, you need to let the muffins cool down completely. If the muffins are warm, the glaze will cause them to become soggy.
  • Scoop: If you have it, use an ice cream scoop to fill each muffin mold. I’ve found it creates less mess, but that’s just me.
  • Lemon glaze: You will have some extra lemon glaze if you decide to make it. So, take it and stick it in the fridge for a couple of hours, and you’ll have a delicious lemon mousse.
two lemon poppy seed muffins

How do I serve vegan lemon poppy seed muffins?

These little gems are perfect for breakfast, brunch, bridal showers, “I'm sorry I ran over you with my car,” or anything else that comes to mind. Everyone will love them!

I also enjoy them with dishes like this vegan frittata, banana-baked oatmeal, tofu scramble, oil-free breakfast potatoes, or savory vegan breakfast bowl.

Want more vegan sweet treats?

Check out these other delicious oil-free, vegan baked goodies. There’s something to satisfy everyone’s sweet tooth…

  • The Best Vegan Banana Bread Recipe (Simple + Moist)
  • Vegan zucchini bread in loaf pan
    Easy Vegan Zucchini Bread Recipe (Oil-Free & Perfectly Moist)
  • The Best Vegan Carrot Cake
  • The Best Vegan Chocolate Chip Cookies (One Bowl)

Let me know if you try this recipe! Leave a comment, rate it, and tag a photo @shaneandsimple on Instagram. Cheers, friends!

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Vegan Lemon Poppy Seed Muffins (Healthy, Oil-free)

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4.8 from 4 reviews

Vegan Lemon Poppy Seed muffins are perfect for breakfast, snacks, or dessert. They’re light, fluffy, and bursting with lemon flavor, making them a delightful treat for any occasion. Enjoy!

  • Author: Shane Martin
  • Prep Time: 10 minutes
  • Cook Time: 20 minutes
  • Total Time: 30 minutes
  • Yield: 12 muffins 1x
  • Category: Dessert
  • Method: Bake
  • Cuisine: American
  • Diet: Vegan

Ingredients

Units Scale

Dry Ingredients

  • 2 cups of organic unbleached all-purpose flour (may sub whole wheat or whole wheat pastry flour)
  • 1 teaspoon baking powder
  • ½ teaspoon baking soda
  • ¼ teaspoon of salt
  • 2 tablespoons of poppy seeds

Wet Ingredients

  • 1 cup of unsweetened almond milk
  • ½ cup of pure maple syrup
  • ¼ cup of unsweetened applesauce
  • ¼ cup of lemon juice
  • 1 teaspoon of pure vanilla extract
  • Zest of 1 lemon

For the Lemon Glaze (optional)

  • 12 ounces of silken tofu (I like Mori Nu firm or extra firm)
  • ⅓ cup of maple syrup
  • ¼ cup of lemon juice
  • Zest of 1 lemon (optional)

Instructions

  1. Preheat the oven: Preheat your oven to 350°F (175°C). Line a muffin tin with paper liners or lightly grease it with a non-stick spray.
  2. Mix dry ingredients: In a large bowl, combine the whole wheat flour, baking powder, baking soda, salt, and poppy seeds, stirring until well combined.
  3. Mix wet ingredients: In a separate bowl, whisk together the maple syrup (or agave nectar), almond milk, applesauce, lemon juice, and lemon zest until well combined.
  4. Combine wet and dry: Pour the wet ingredients into the dry ingredients. Stir until just combined, being careful not to overmix. A few lumps are okay.
  5. Fill the muffin tin: Divide the batter evenly among the muffin cups, filling each about ¾ full.
  6. Bake: Place the muffin tin in the preheated oven and bake for 18-20 minutes, or until a toothpick inserted into the center of a muffin comes out clean.
  7. Lemon glaze: While baking the muffins, begin preparing the lemon glaze. Add all the ingredients to a blender and process until smooth and creamy. Cover and let the icing sit and room temperature until the lemon poppy seed muffins are ready.
  8. Cool: After removing the muffins from the oven, let them sit in the tin for a few minutes before transferring them to a wire rack to cool completely.
  9. Serve: Once cooled, drizzle with lemon glaze if you so desire, serve, and enjoy!

Equipment

Cupcake Liners

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Glass Mixing Bowls

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Image of Maple Syrup

Maple Syrup

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Muffin Pan

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Image of Standard Cupcake Liners

Standard Cupcake Liners

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Image of Whole Wheat Pastry Flour

Whole Wheat Pastry Flour

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Notes

  • Do Not Overmix: When combining the dry and wet mixtures, gently stir and fold the batter to avoid overmixing, which leads to dense and chewy muffins. A few lumps are ok. Think, pancakes.
  • Measure the Flour: When measuring flour, don't eyeball it or scoop it out. Avoid packing or tapping the cup. After filling, use a butter knife or scraper to brush off any excess flour.
  • Room Temperature: The batter will mix much better and create a smoother texture if the wet and dry ingredients are close to the same temperature.
  • Let the Lemon Poppy Seed Muffins Cool: We all want to dive in and chow down, but good things come to those who wait. But if you plan on adding glaze, you need to let the muffins cool down completely. If the muffins are warm, the glaze will cause them to become soggy.
  • Scoop: If you have it, use an ice cream scoop to fill each muffin mold. I've found it creates less mess, but that's just me.
  • Lemon glaze: You will have some extra lemon glaze if you decide to make it. So, take it and stick it in the fridge for a couple of hours, and you'll have a delicious lemon mousse.

Nutrition

  • Serving Size: 1 muffin
  • Calories: 122
  • Sugar: 9.3 g
  • Sodium: 148.8 mg
  • Fat: 1.2 g
  • Carbohydrates: 25.1 g
  • Fiber: 3.1 g
  • Protein: 3.1 g
  • Cholesterol: 0 mg

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Reader Interactions

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    Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star

  1. Amy

    July 14, 2025 at 9:23 am

    I’m so grateful to find a WFPB lemon muffin recipe! These were so good and no processed sugar. I will definitely make again. I did make them without the glaze and they were delicious!

    Reply
  2. Angie

    March 02, 2025 at 12:41 pm

    These muffins were good. We went without the indulgence of the glaze and they were good like that. To be fair, the only other lemon poppy seed muffins I’ve made used a box of Jell-o Instant Lemon Pudding, so that’s not really a fair comparison 🙂 We enjoyed these for a couple days with breakfast; the lemon flavor was very nice and the texture was fine. I live at 4500 feet, so I will make a high altitude adjustment next time I make them so they will rise a little more and be less dense. I used hard white whole wheat flour freshly ground. If the glaze is added, that is almost a cup of maple syrup and it is on the expensive side, so I may not make them very often.

    Reply
  3. Carol

    February 25, 2025 at 7:53 pm

    Yummmmmmm!!! Shane, I’m 78. When I was a kid, my Aunt Mary would make lemon/honey/poppy seed bread in a loaf pan!! OMGOSH it was sooooooooooooo yummy!! Could this recipe be baked in a loaf pan?

    Reply
    • Shane Martin

      February 26, 2025 at 11:56 am

      Yes, you could totally make this in a loaf pan.

      Reply
  4. MIKE

    March 17, 2024 at 10:11 pm

    OMG…these were so freaking good. I could not believe they were oil-free. Lemon muffins are my absolute favorite, and it’s almost springtime. YEAH, BABY!

    Reply
  5. Shane Martin

    March 07, 2024 at 10:30 am

    Healthy Lemon Poppy Seed muffins are perfect for breakfast, snacks, or dessert. They’re light, fluffy, and bursting with lemon flavor, making them a delightful treat for any occasion. Vegan, oil-free, and ready in less than 30 minutes!

    Reply
    • Gail

      March 13, 2024 at 7:38 pm

      I just tried to make the lemon poppy seed muffins using almond flour. It was the consistency of soup. Would the type of flour I used be that much different? Are all the measurements correct on the recipe? The flavor was wonderful and I would like to try and make again but I do need to know that all dry and liquid quantities are correct.

      Reply
      • Shane Martin

        March 13, 2024 at 9:44 pm

        Almond flour will not work with muffin recipes that need to rise. If you are trying to keep it gluten-free use a gluten-free 1:1 to flour blend.

        Reply

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Shane Martin

Hi, I'm Shane! I’m an average dude who loves to cook and eat good food that happens to be completely plant-based.

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